Table 2

Comparison of M1-MCM subset motifs to UniPROBE data.

Gene set

SCOPE motifs

UniPROBE match

E-value

Motif coverage


M-G1 MCM

ttcchhwwddggaar

Mcm1

6.5E-05

100.0%


Cluster A

aawttyy

Sfp1

3.9E-04

100.0%



M-G1 MCM

cacgtgdg

Cbf1

1.3E-03

44.4%


Cluster B

Pho4

4.5E-03


acgtg

Cbf1

4.9E-05

77.8%


Rtg3

1.7E-03


Pho4

3.5E-03


Tye7

8.6E-03


cccnnnnngga

Mcm1

3.0E-03

77.8%


aaacannnnnnnnttgc

Fkh1

1.0E-03

44.4%


Fkh2

4.0E-03



M-G1 MCM

ttttnnnnnnnnnntaa

Sfp1

1.5E-03

39.1%


Cluster C


Martyanov and Gross BMC Genomics 2010 11(Suppl 2):S8   doi:10.1186/1471-2164-11-S2-S8

Open Data