Table 3

Data discretization

Pre-discretized data for an in-silico regulatory network consisting of 5 genes


wt

G1(-/-)

G2(-/-)

G3(-/-)

G4(-/-)

G5(-/-)

G6(-/-)

G7(-/-)

G8(-/-)


G1

0.105

0.034

0.927

0.088

0.015

0.049

0.102

0.105

0.018

G2

0.877

0.804

0.000

0.864

0.870

0.981

0.837

0.873

0.797

G3

0.054

0.000

0.838

0.000

0.103

0.000

0.069

0.000

0.085

G4

0.386

0.310

0.611

0.243

0.083

0.432

0.440

0.394

0.364

G5

0.801

0.808

0.748

0.903

0.793

0.000

0.880

0.741

0.686


Post-discretized data for the same in-silico regulatory network consisting of 5 genes, k = 2.


wt

G1(-/-)

G2(-/-)

G3(-/-)

G4(-/-)

G5(-/-)

G6(-/-)

G7(-/-)

G8(-/-)


G1

0

0

1

0

0

0

0

0

0

G2

1

1

0

1

1

1

1

1

1

G3

0

0

1

0

0

0

0

0

0

G4

1

0

1

0

0

1

1

1

1

G5

1

1

1

1

1

0

1

1

1


Discretization of data by k-means clustering for an in-silico network consisting of 5 genes [17] - genes are divided by row, samples are divided by column.

Oviatt et al. BMC Genomics 2010 11(Suppl 2):S6   doi:10.1186/1471-2164-11-S2-S6

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