Table 5

Increase of No. of identified true DEGs out of top K predictions with or without DB pruning. Rp’, Wad’, tTest’, FC’ are algorithms with DB pruning. The total number of true DEGs of the 17 datasets is 284.

K=150

K=250

K=350

K=450

K=550


Rp/Rp’

74/78

81/91

92/104

98/122

106/141


Fc/Fc’

97/98

120/137

146/159

164/184

178/198


tTest/tTest’

132/150

163/181

179/206

191/218

202/234


Wad/Wad’

156/156

195/198

221/221

227/227

240/240


Hu and Xu BMC Genomics 2010 11(Suppl 2):S3   doi:10.1186/1471-2164-11-S2-S3

Open Data