Table 5 |
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|
Repetitive motifs containing transmembrane and extracellular proteins |
||||||
|
ID |
BLASTX |
Pfam/Interpro |
L |
Repeat |
ESTs |
|
|
|
||||||
|
cn349 |
Multicystatin |
No significant hit |
EC |
2X |
DKIPKSVLEFGINKLELSNVFAHKDFSKIENAQMKVVSGYIYKFTLVYQFSEQEHKFEIQVWSKADQTLELISMKEIT |
7 |
|
cn66 |
Unknown protein |
EGF-like domain |
EC |
4X |
YVNNGSCSSNSTLFNFTSKNCEKSCG |
22 |
|
cn65 |
Insect antifreeze protein |
EGF-like domain |
EC |
5X |
LFNFTSKNCEKSCGESGY |
10 |
|
cn131 |
Protein disulfide-isomerase domain containing protein |
Protein disulphide isomerase family |
EC |
3X |
EEKEEK |
9 |
|
cn85 |
Predicted protein |
Ricin-type beta-trefoil lectin domain |
EC |
4X |
VLDVYG |
8 |
|
cn81 |
Chitinase |
Glycoside hydrolase, family 18 domain, chitinase active site |
EC |
2X |
YARGYELCKTPGDKLDKIFYAFLNPTTG |
|
|
CiTo 53E07 |
Membrane associated protein |
No significant hit |
TM |
9X |
FSFLLFFFFFSFWS |
1 |
|
CiTo 12F11 |
No significant hit |
EGF-like domain, Metridin-like ShK toxin |
EC |
3X |
AETGST |
1 |
|
CiTo 13H10 |
Tenascin |
EGF domain |
TM |
3X |
PNNCSG |
|
|
CiTo 26C11 |
No significant hit |
No significant hit |
TM |
3X |
EKCRCL |
1 |
|
CiTo 2H11 |
No significant hit |
No significant hit |
EC |
3X |
AKTAAE |
1 |
|
CiTo 6G09 |
Cation diffusion facilitator family transporter |
Cation efflux protein family |
TM |
3X |
GHGHSH |
1 |
|
|
||||||
|
L, Localization; TM, transmembrane domain; EC, extracellular |
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|
Lokanathan et al. BMC Genomics 2010 11:76 doi:10.1186/1471-2164-11-76 |
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