Additional file 4.
Target prediction of H/ACA box snoRNAs. The guide sequences of H/ACA box snoRNAs were identified within the internal loop(s) of one (or both) hairpin structures. "p5" refers to guide sequences located in the 5'-end hairpin structures of snoRNA; "p3" refers to those in the 3'-end hairpins. The two nucleotides at the junction sites between the stem and the loop in guide sequences are shown in lower case. The predicted pseudouridine sites are denoted by lower case "u".
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Zhang et al. BMC Genomics 2010 11:61 doi:10.1186/1471-2164-11-61