Table 5 |
||
|
Protein-encoding transposable elements in V. destructor |
||
|
Class |
Family |
Number identified |
|
|
||
|
DNA |
TcMar-Mariner |
6511 |
|
|
||
|
DNA |
TcMar-Tc1 |
357 |
|
|
||
|
DNA |
hAT |
58 |
|
|
||
|
DNA |
TcMar-Fot1 |
27 |
|
|
||
|
DNA |
MuDR |
12 |
|
|
||
|
Helitron |
Helitron |
338 |
|
|
||
|
LINE |
R1 |
981 |
|
|
||
|
LINE |
L2 |
93 |
|
|
||
|
LINE |
CR1 |
83 |
|
|
||
|
LINE |
BovB |
47 |
|
|
||
|
LINE |
Jockey |
28 |
|
|
||
|
LINE |
L1 |
17 |
|
|
||
|
LTR |
Gypsy |
914 |
|
|
||
|
LTR |
Pao |
102 |
|
|
||
|
LTR |
Copia |
74 |
|
|
||
|
LTR |
Gypsy-Cigr |
31 |
|
|
||
|
Transposable elements identified with the protein-level repeat masking mode of RepeatMasker [44]. Class abbreviations are DNA, type II DNA transposon; LINE, long interspersed nuclear element; LTR, long-terminal repeat retrotransposon. Family designations are those of RepBase [68]. |
||
|
Cornman et al. BMC Genomics 2010 11:602 doi:10.1186/1471-2164-11-602 |
||
