|Numbers of beads|
|Quantity of starting RNA:||250 ng||100 ng||50 ng||10 ng|
|Removed by BASH||200,459||408,721||284,088||50,449|
|Removed in summarization||651,323||614,495||603,619||582,345|
|In analysis-group bead-types||7,963,638||7,475,940||7,563,440||8,248,259|
Summing across all array-sections in the four experiments, we list the total numbers of beads (as decoded by Illumina), the numbers we remove as being in spatial artefacts using BASH , those removed as being outliers in the summarization, the remainders, and the numbers remaining that lie in the analysis-group of bead-types.
Lynch et al.
Lynch et al. BMC Genomics 2010 11:540 doi:10.1186/1471-2164-11-540