Table 1

Differentially expressed gene lists of OS epithelial regions

Ocular Regions

Total genes

Up-reg genes

Down-reg

genes

DAVID IDs

IPA IDs


mapped

unmapped

mapped

unmapped


LEC

704

95

609

483

115

548

156


Limbus

463

169

294

294

79

355

106


Cornea

1649

1237

412

939

192

1273

370


LEC Stroma

329

113

216

234

52

266

70


Conj

400

281

119

295

77

305

95


In DAVID 2008 and Ingenuity Pathway Analysis the mapped gene IDs were analysed and the unmapped gene IDs were excluded as these were either unknown genes, ESTs, sequences or duplicated genes.

Kulkarni et al. BMC Genomics 2010 11:526   doi:10.1186/1471-2164-11-526

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