Figure 3.

Visualization of allelic bias in NSR-seq data. (a) For each RefSeq transcript in adipose, the total number of informative reads was plotted against the difference in reads between alleles. The 99% confidence interval (from the binomial distribution) is shown in green, with points above the upper line or below the lower line falling outside the expected range for 99% of a random data set (lacking ASE). (b) The same as part (a), but showing SNPs that fall outside of RefSeq transcripts. These regions were not assayed on our microarrays, but still show pronounced ASE.