Table 1

Positions and gene lengths in the mitochondrial genomes of T. multiceps (Tm), T. hydatigena (Th) and T. pisiformis (Tp)

Genes

Positions and lengths of nucleotide sequences (bp)

Initiation and termination codons

Anticodons

Tm

Th

Tp

Tm

Th

Tp

Tm/Th/Tp


trnG

1-65 (65)

1-66 (66)

1-72 (72)

TCC

cox3

69-713 (645)

70-714 (645)

76-719 (643)

ATG/TAA

GTG/TAA

GTG/T

trnH

721-794 (74)

717-783 (67)

720-790 (71)

GTG

Cytb

798-1865 (1068)

787-1854 (1068)

794-1861(1068)

ATG/TAG

ATG/TAA

ATG/TAA

nad4L

1882-2142 (261)

1864-2124 (261)

1866-2126 (261)

ATG/TAA

ATG/TAG

ATG/TAG

nad4

2109-3362 (1254)

2091-3344 (1254)

2093-3346 (1254)

ATG/TAA

ATG/TAA

ATG/TAA

trnQ

3372-3436 (65)

3352-3411 (60)

3347-3409 (63)

TTG

trnF

3436-3499 (64)

3409-3472 (64)

3409-3471 (63)

GAA

trnM

3496-3560 (65)

3469-3532 (64)

3468-353 1(64)

CAT

atp6

3568-4083 (516)

3540-4055 (516)

3538-4050 (516)

ATG/TAG

ATG/TAA

GTT/TAA

nad2

4086-4967 (882)

4059-4937 (879)

4053-4928 (876)

GTG/TAA

ATG/TAA

ATG/TAA

trnV

4976-5041 (66)

4953-5014 (62)

4933-4994 (62)

TAC

trnA

5064-5127 (64)

5033-5096 (64)

5008-5070 (63)

TGC

trnD

5134-5200 (67)

5102-5168 (67)

5081-5143 (63)

GTC

nad1

5205-6098 (894)

5174-6067 (894)

5148-6044 (897)

ATG/TAA

ATG/TAA

ATG/TAG

trnN

6102-6169 (68)

6071-6137 (67)

6053-6119 (67)

GTT

trnP

6188-6252 (65)

6156-6218 (63)

6135-6197 (63)

TGG

trnI

6254-6320 (67)

6220-6284 (65)

6198-6260 (63)

GAT

trnK

6332-6396 (65)

6286-6350 (65)

6267-6330 (64)

CTT

nad3

6398-6745 (348)

6351-6698 (348)

6331-6677 (347)

ATG/TAA

GTG/TAA

ATG/T(A)

trnS(AGN)

6752-6810 (59)

6699-6757 (59)

6678-6737 (60)

GCT

trnW

6820-6887 (68)

6765-6827 (63)

6739-6802 (64)

TCA

cox1

6891-8513 (1623)

6831-8450 (1620)

6806-8425 (1620)

ATG/TAA

ATG/TAA

ATG/TAA

trnT

8499-8561 (63)

8436-8498 (63)

8411-8473 (63)

TGT

rrnL

8562-9539 (978)

8499-9472 (974)

8474-9443 (970)

trnC

9540-9600 (61)

9473-9531 (59)

9444-9501(58)

GCA

rrnS

9601-10340 (740)

9532-10258 (727)

9502-10229 (728)

cox2

10341-10919 (579)

10259-10840 (582)

10230-10814 (585)

ATG/TAA

ATG/TAG

ATG/TAG

trnE

10935-11002 (68)

10847-10914 (68)

10820-10885 (66)

TTC

nad6

11003-11455 (453)

10917-11369 (453)

10887-11339 (453)

GTG/TAG

ATG/TAG

ATG/TAA

trnY

11468-11530 (63)

11377-11441 (65)

11345-11406 (62)

GTA

SNR

11531-11603 (73)

11442-11505 (64)

11407-11473 (67)

trnL(CUN)

11604-11671 (68)

11506-11571 (66)

11474-11542 (69)

TAG

trnS(UCN)

11720-11777 (58)

11605-11662 (58)

11574-11634 (61)

TGA

trnL(UUN)

11792-11856 (65)

11664-11727 (64)

11637-11698 (62)

TAA

trnR

11887-11944 (58)

11732-11788 (57)

11700-11754 (55)

ACG

nad5

11946-13517 (1572)

11789-13357 (1569)

11758-13323 (1566)

ATG/TAA

ATG/TAA

ATG/TAA

LNR

13518-13693 (176)

13358-13492 (135)

13324-13387 (64)


Start and stop codons for protein-coding genes as well as lengths of their predicted amino acid sequences and tRNA gene anticodons (starting from trnG). SNR and LNR refer to short and long non-coding regions respectively.

Jia et al. BMC Genomics 2010 11:447   doi:10.1186/1471-2164-11-447

Open Data