Table 7 |
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|
Detailed description of genes and unassigned regions (UR) within the partial mt genome of Vermetus erectus |
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|
Gene |
Starta |
End |
Length |
Amino acids |
Start codon |
End codonb |
UR (%AT)c |
|
|
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|
rrnS |
1 |
429 |
429 |
- |
- |
- |
0 |
|
trnV |
430 |
499 |
70 |
- |
- |
- |
0 |
|
rrnL |
500 |
1756 |
1257 |
- |
- |
- |
0 |
|
trnLUUR |
1757 |
1819 |
63 |
- |
- |
- |
3 |
|
trnLCUN |
1823 |
1887 |
65 |
- |
- |
- |
1 |
|
nad1 |
1889 |
2824 |
936 |
312 |
ATG |
TAG |
18 (66.7) |
|
trnH |
2843 |
2904 |
62 |
- |
- |
- |
10 (60.0) |
|
trnI |
2915 |
2980 |
66 |
- |
- |
- |
0 |
|
nad3 |
2981 |
3331 |
351 |
117 |
ATG |
TAG |
3 |
|
cox2 |
3335 |
4022 |
688 |
229 |
ATG |
T-- |
0 |
|
cox1 (partial) |
4023 |
4718 |
696 |
232 |
ATG |
N/A |
0 |
|
|
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|
a Genes are not arranged relative to cox1 because only a partial genome is available. Those genes encoded on the "-" strand are indicated with an asterisk (*). b T, and TA, refer to instances where incomplete stop codons were inferred. c Unassigned regions are identified by positive values. Negative values indicate overlap between adjacent genes. Values in brackets refer to %AT of the associated UR (only those UR >10 bp in length were analyzed). |
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|
Rawlings et al. BMC Genomics 2010 11:440 doi:10.1186/1471-2164-11-440 |
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