Additional file 1.

Figure S1 - sRNA counts in TE families. Box plots represent the distribution of the total counts of sRNA perfectly matching wheat TEs of each family in the seven major superfamilies deposited in the TREP database. Numbers above the whiskers represent the number of TREP elements within each superfamily considered. Figure S2 - LTR length in Copia and Gypsy TEs. Box plots represent the distribution of LTR lengths in the Copia and Gypsy elements deposited in the TREP database. Table S1 - Summary of sRNA libraries. Table S2 - Distribution of sRNA counts in the EU835198 genomic region (T. turgidum). Table S3 - Distribution of sRNA counts in the DQ871219 genomic region (T. turgidum). Table S4 - Distribution of sRNA counts in the EF540321 genomic region (T. turgidum). Table S5 - Distribution of sRNA counts in the EF567062 genomic region (T. aestivum). Table S6 - Distribution of sRNA counts in the DQ537335 genomic region (T. aestivum). Table S7 - sRNA counts in the different TE families. Table S8 - Estimates of LTR age of insertion and cytosine methylation in the CG, CHG, and CHH contexts.

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Cantu et al. BMC Genomics 2010 11:408   doi:10.1186/1471-2164-11-408