Table 5

Top 20 gene expression candidates in RNA binding proteins.

Gene symbol

Proposed functions (GO)

P-value of changes of gene expression

P-value of changes of alternative splicing


Slc6a1

Neurotransmitter transport

3.74 e-11

3.19 e-08


Dnajc6

Heat shock protein binding

2.35 e-10

1.27 e-04


Igf2bp1

mRNA stability

2.13 e-09

6.04 e-05


Enox1

Transport

6.26 e-09

1.53 e-04


Krr1

Ribosome biogenesis

6.38 e-09

N/A


Rbm13 (Mak16)

Ribosome biogenesis (yeast)

6.45 e-09

N/A


Ddx39

RNA splicing, RNA helicase

6.89 e-09

1.74 e-04


Nol9

Unknown

8.02 e-09

6.76 e-05


Zfp462

Transcription regulator (during development)

8.98 e-09

7.13 e-04


Nup37

Transport

1.86 e-08

N/A


Rbm9 (Fox-2)

RNA splicing

2.02 e-08

5.96 e-06


Pprc1

Transcription regulation

2.24 e-08

5.81 e-05


Pcbp3

Unknown

3.13 e-08

5.54 e-04


Elavl3

Cell differentiation, development

3.29 e-08

4.25 e-06


Mki67ip (Nifk)

Unknown

4.05 e-08

1.57 e-06


Rbms3

Unknown

7.05 e-08

N/A


Nup43

Transport

8.34 e-08

N/A


Rbm19

rRNA processing, ribosome biogenesis

8.34 e-08

N/A


Brunol4 (Celf4)

Splicing regulator

1.79 e-07

2.80 e-08


Eif3d

Translation initiation

2.28 e-07

7.34 e-04


Revil et al. BMC Genomics 2010 11:399   doi:10.1186/1471-2164-11-399

Open Data