BMC Genomics

official impact factor 4.21

Open Access

Heart transcriptome of the bank vole (Myodes glareolus): towards understanding the evolutionary variation in metabolic rate

Wiesław Babik*, Michał Stuglik, Weihong Qi, Marzanna Kuenzli, Katarzyna Kuduk, Paweł Koteja and Jacek Radwan

BMC Genomics 2010, 11:390 doi:10.1186/1471-2164-11-390

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Research article   Open Access

Sequence comparison of prefrontal cortical brain transcriptome from a tame and an aggressive silver fox (Vulpes vulpes)

Anna V Kukekova, Jennifer L Johnson, Clotilde Teiling, Lewyn Li, Irina N Oskina, Anastasiya V Kharlamova, Rimma G Gulevich, Ravee Padte, Michael M Dubreuil, Anastasiya V Vladimirova, Darya V Shepeleva, Svetlana G Shikhevich, Qi Sun, Lalit Ponnala, Svetlana V Temnykh, Lyudmila N Trut, Gregory M Acland BMC Genomics 2011, 12:482 (3 October 2011)

Research   Open Access

Reptilian-transcriptome v1.0, a glimpse in the brain transcriptome of five divergent Sauropsida lineages and the phylogenetic position of turtles

Athanasia C Tzika, Raphaël Helaers, Gerrit Schramm, Michel C Milinkovitch EvoDevo 2011, 2:19 (26 September 2011)

Research article   Open Access

A multi-organ transcriptome resource for the Burmese Python (Python molurus bivittatus)

Todd A Castoe, Samuel E Fox, AP Jason de Koning, Alexander W Poole, Juan M Daza, Eric N Smith, Todd C Mockler, Stephen M Secor, David D Pollock BMC Research Notes 2011, 4:310 (25 August 2011)

Software   Open Access Highly Accessed

ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using Next Generation Sequence

Jose M Blanca, Laura Pascual, Peio Ziarsolo, Fernando Nuez, Joaquin Cañizares BMC Genomics 2011, 12:285 (2 June 2011)

A new software pipeline, ngs_backbone, provides a flexible tool for read cleaning, transcriptome assembly and annotation, read mapping and single nucleotide polymorphism prediction of next generation sequencing data from several sequencing platforms.