Open Access Highly Accessed Research article

Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types

Shaogui Guo12, Yi Zheng23, Je-Gun Joung2, Shiqiang Liu4, Zhonghua Zhang4, Oswald R Crasta5, Bruno W Sobral5, Yong Xu1, Sanwen Huang4* and Zhangjun Fei26*

Author Affiliations

1 National Engineering Research Center for Vegetables, Beijing 100097, China

2 Boyce Thompson Institute, Cornell University, Ithaca, NY 14853, USA

3 Department of Ornamental Horticulture, China Agricultural University, Beijing 100094, China

4 Key Laboratory of Horticultural Crops Genetic Improvement of Ministry of Agriculture, Sino-Dutch Joint Lab of Horticultural Genomics Technology, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China

5 Virginia Bioinformatics Institute, Virginia Tech University, Blacksburg, VA 24061, USA

6 USDA Robert W. Holley Center for Agriculture and Health, Tower Road, Ithaca, NY 14853, USA

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BMC Genomics 2010, 11:384  doi:10.1186/1471-2164-11-384

Published: 17 June 2010

Additional files

Additional file 1:

List of alternatively spliced genes. The table provides the list of alternative splicing events and alternatively spliced genes identified from cucumber ESTs.

Format: XLS Size: 641KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 2:

List of differentially expressed genes. The table provides the list of genes differentially expressed in flowers of gynoecious (WI1983G) and hermaphroditic (WI1983H) plants.

Format: XLS Size: 68KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

Cucumber SSRs. The table provides the list of SSRs identified from cucumber ESTs, their motif sequences and surrounding primer pair information.

Format: XLS Size: 1MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 4:

Cucumber SNPs. The table provides the list of SNPs identified from the cucumber EST collection.

Format: XLS Size: 65KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data