Table 3

List of P. falciparum Chromatin-related Factors sorted by functions.

Sub-classes

Gene ID

Annotation


1. Histones

PFC0920w

Histone H2A

PFF0860c

Histone H2A

PF07_0054

Histone H2B

PF11_0062

Histone H2B

PF13_0185

Histone H3

PFF0510w

histone H3

PFF0865w

Histone H3

PF11_0061

Histone H4

2. Chromatin structuration

PF10_0328

bromodomain protein

PF14_0724

bromodomain protein

PFA0510w

bromodomain protein

PFL0635c

bromodomain protein

PF11_0418

chromodomain protein

PFL1005c

PfHP1 (chromodomain protein)

PFB0875c

Chromatin-binding protein, putative

PFF1185w

ISW1::ISW1 homologue

PF10_0232

SAGA/SILK::CHD1 homologue

PFB0730w

SWI/SNF::SNF2 homologue

PF13_0308

SWI/SNF::SNF2 like

PF08_0048

SWR1::SWR1

PFF0225w

DNA helicase

MAL8P1.65

FUN30 homologue

PF11_0053

PfSNF2L: chromatin accessibility complex::ISW2 homologue

PFI0590c

zf-HIT protein

PF14_0314

chromatin assembly factor 1 p55 subunit, putative

PFA0520c

chromatin assembly factor 1 protein WD40 domain, putative

3. Chromatin remodelling

PFE0090w

chromosome assembly factor 1, CAF-1

PF14_0393

FACT::POB3

PFE0870w

FACT::SPT16

PF08_0100

SWR1::RVB1 homologue

PF11_0071

SWR1::RVB1 homologue

PF13_0330

SWR1::RVB2 homologue

PF14_0608

SWR1::SWC2 homologue

PFF1385c

SWR1/NuA4::SWC4 homologue

PFI0930c

nucleosome assembly protein (PfB7)

PFL0185c

nucleosome assembly protein 1

PFL0145c

PfHMGB1

MAL8P1.72

PfHMGB2

MAL13P1.290

PfHMGB4

4. Modifying enzymes

MAL13P1.255

adenine-specific methylase

PF11_0192

HAT, NuA4::ESA1

PF08_0034

HAT, ADA/SAGA::GCN5

MAL8P1.200

HAT, histone acetyl transferase

PF10_0036

HAT, histone acetyl transferase

PF13_0131

HAT, histone acetyl transferase

PF14_0350

HAT, histone acetyl transferase

PFA0465c

HAT, histone acetyl transferase

PFF1405c

HAT, histone acetyl transferase

PF10_0078

HDAC, Histone deacetylase

PF14_0690

HDAC, Histone deacetylase

PFI1260c

HDAC, Histone deacetylase

PF13_0152

HDAC, SIR2 family

PF14_0489

HDAC, SIR2 family

MAL8P1.111

histone demethylase JHD2

MAL13P1.19

SAGA/NuA4::TRA1

MAL13P1.122

SET domain protein

PF08_0012

SET domain protein

PF11_0160

SET domain protein

PFD0190w

SET domain protein

PFF1440w

SET domain protein

PFL0690c

SET histone-lysine N-methyltransferase, putative

MAL7P1.37

SIN3-repressing complex::p18

MAL8P1.131

SWR1/NuA4::YAF9 homologue


Bischoff and Vaquero BMC Genomics 2010 11:34   doi:10.1186/1471-2164-11-34

Open Data