Table 2

List of P. falciparum General Transcription Factors sorted by functions.

Sub-classes

Gene ID

Annotation


1. Polymerase core subunit

MAL13P1.213

RNA POLYMERASE I/II/III::Rbp-12

PF07_0027

RNA POLYMERASE I/II/III::Rpb-10

PF13_0341

RNA POLYMERASE I/II/III::Rpb-5

PFC0155c

RNA POLYMERASE I/II/III::Rpb-6

PFL0665c

RNA POLYMERASE I/II/III::Rpb-8

PFC0805w

RNA POLYMERASE II::Rpb-1

PF13_0023

RNA POLYMERASE II::Rpb-11

PFB0715w

RNA POLYMERASE II::Rpb-2

PFI1130c

RNA POLYMERASE II::Rpb-3

PFB0245c

RNA POLYMERASE II::Rpb-4

PF10_0269

RNA POLYMERASE II::Rpb-7

PFA0505c

RNA POLYMERASE II::Rpb-9

2. Polymerase accessories

PF08_0037

RNA polymerase II mediator complex protein MED7

PF14_0718

RNA polymerase II-associated factor SOH1

3. General coactivators involved in initiation

PF13_0043

CCAAT Box-binding complex::CBF-C/NF-Y-A

PF11_0477

CCAAT Box-binding complex::CBF-C/NF-Y-B

PF14_0374

CCAAT Box-binding complex::CBF-C/NF-Y-C

MAL7P1.78

TFIIA::TFIIA alpha

PFI1630c

TFIIA::TFIIA gamma

PFL2435w

TFIIA::TFIIA gamma

PFA0525w

TFIIB::TFIIB

PFE0415w

TFIIB::TFIIB-like

PFL1645w

TFIID::TAF1

MAL7P1.134

TFIID::TAF2

PFI1425w

TFIID::TAF7

PFE0305w

TFIID::TBP

PF14_0267

TFIID::TBP-like

PFE1110w

TFIID/SAGA::TAF10

MAL7P1.86

TFIIE::TFIIE alpha

MAL13P1.360

TFIIE::TFIIE beta

PFC1055w

TFIIH core p62/TFB1

PF14_0398

TFIIH core TFB5

PF13_0022

TFIIH::cyclin K

PFE0610c

TFIIH::MAT1

PF13_0279

TFIIH::p34

MAL13P1.76

TFIIH::p44

PFL2125c

TFIIH::p52

PF10_0369

TFIIH::XPB

PFI1650w

TFIIH::XPD

4. General coactivators involved in initiation and elongation

PF11_0458

TFIIF::TFIIF beta

MAL8P1.104

CCR4-NOT complex::CAF1

PFE0375w

CCR4-NOT complex::CAF40

PFA0350w

CCR4-NOT complex::CCR4

PFC0850c

CCR4-NOT complex::CCR4

PFE0980c

CCR4-NOT complex::CCR4

PF11_0049

CCR4-NOT complex::NOT1

PF14_0170

CCR4-NOT complex::NOT1

PF11_0297

CCR4-NOT complex::NOT2

PF10_0062

CCR4-NOT complex::NOT3/NOT5

PFL1705w

CCR4-NOT complex::NOT4

PF14_0241

General transcription factor BTF3

PF11_0293

Transcriptional co-activator MBF1

5. General coactivators involved elongation

PF10_0293

DSIF::SPT4

PFF0535c

DSIF::SPT5

PF14_0059

SPT6

PF07_0057

TFIIS


Bischoff and Vaquero BMC Genomics 2010 11:34   doi:10.1186/1471-2164-11-34

Open Data