Table 7

Overlap of CpG islets (N = 88,137) with different sets of promoters and evolutionarily conserved elements.

Genome element

Number of overlapping CpG islets

Number of overlapping CpG islets exclusively predicted by CpG cluster


Promoters from RefSeq database

9,826 (11.15%)

1,218 (12.40%)


TSSs from DBTSS database

1,868 (2.12%)

398 (21.31%)


Promoter regions from DBTSS database

6,510 (7.39%)

4,869 (74.79%)


PhastCons

17,613 (19.98%)

8,219 (46.66%)


Hackenberg et al. BMC Genomics 2010 11:327   doi:10.1186/1471-2164-11-327

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