Table 1

General features of L. striatellus EST libraries

Viruliferous sample

Naïve sample

Combined sample


Total bases (bp)

44741850

51825899

96567749

High-quality readsa

201281

218681

419962

Average reads length (bp)

222

237

230

Number of contigs

9936

9417

16885

Average contig length (bp)

376

362

384

Range of contig length (bp)

60~3752

61~4182

61~8651

Number of reads in contigs

174662

165212

383067

Number of singletons

14331

14117

24607

Unigenes (contigs + singletons)

24267

23534

41492

Matched CDSs b

22664

22447

38019

Specific sequences

15746

14318

-


a. Adaptors and low-quality reads were excluded.

b. Matched CDS means the number of predicted protein coding sequences from unigenes.

Zhang et al. BMC Genomics 2010 11:303   doi:10.1186/1471-2164-11-303

Open Data