Table 2

Protein sorting components encoded in the K. stuttgartiensis genome

Candidatus Kuenenia stuttgartiensis homologues of proteins involved in protein sorting


Protein

Function

Subcellular Location

Kuenenia homologue

Accession Number


SecY

SecYEG translocation complex

Membrane

kuste2983

CAJ73737

SecE

SecYEG translocation complex

Membrane

kuste2951

CAJ73704

SecG

SecYEG translocation complex

Membrane

kuste4254

CAJ75016

SecB

chaperone

Cytoplasm

-

-

SecA

ATPase motor protein

Cytoplasm

kustb0170

CAJ70915

SecDF

SecDF-YajC accessory complex

Membrane

kustd1962

CAJ72707

YajC

SecDF-YajC accessory complex

Membrane

kustd1963

CAJ72708

YidC

membrane protein assembly

Membrane

kustd1734

CAJ72479


TatA/B

Transmembrane pore

Membrane

kuste2348

CAJ73093

TatC

Tat signal recognition

Membrane

kustc0286

CAJ71031


Signal Peptidase I

Sec signal peptidase

Membrane

kuste3749

CAJ74512

Signal Peptidase II

lipoprotein signal peptidase

Membrane

kuste4338

CAJ75100

Signal Peptidase IV

prepilin signal peptidase

Membrane

kustc0984

CAJ71729


FtsY

SRP receptor

Membrane

kustc0279

CAJ71024

Ffh

Major SRP subunit

Cytoplasm

kuste3317

CAJ74078


Putative Candidatus Kuenenia stuttgartiensis orthologues of proteins that are known to be involved in protein sorting. Orthology is based on reciprocal best Blast hits and on the unique presence of PFAM functional domains.

Medema et al. BMC Genomics 2010 11:299   doi:10.1186/1471-2164-11-299

Open Data