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Open Access Highly Accessed Research article

A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling

James R Bradford1, Yvonne Hey2, Tim Yates1, Yaoyong Li1, Stuart D Pepper2 and Crispin J Miller1*

Author Affiliations

1 Applied Computational Biology and Bioinformatics, Cancer Research UK, Paterson Institute for Cancer Research, The University of Manchester, Wilmslow Road, Manchester M20 4BX UK

2 Molecular Biology Core Facility, Cancer Research UK, Paterson Institute for Cancer Research, The University of Manchester, Wilmslow Road, Manchester M20 4BX UK

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BMC Genomics 2010, 11:282  doi:10.1186/1471-2164-11-282

Published: 5 May 2010

Additional files

Additional file 1:

Supplementary Material. Supplementary Text ("Pooling RNA-Seq replicates", "Gene level correspondence"), Supplementary Figures S1-S14, and Supplementary Table S2.

Format: DOC Size: 2.6MB Download file

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Additional file 2:

Supplementary Table S1. A list of novel exon junctions detected in (a) MCF-10a and (b) MCF-7.

Format: XLS Size: 55KB Download file

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