Table 2

Clustering statistics for each library.

Lib name

HQ ESTs

Contigs

Singletons

Total

Coverage

Discovery


Br3

10,051

1,245

6,935

8,180

0.1862

1.229

D0-4

7,891

991

5,517

6,508

0.1753

1.213

D5-15

8,001

1,045

5,171

6,216

0.2231

1.287

D16-40

8,101

773

6,294

7,067

0.1276

1.146

Gi1

5,032

576

2,875

3,451

0.3142

1.458

Gi2

4,164

357

3,206

3,563

0.1443

1.169

GOHD

3,936

367

2,806

3,173

0.1939

1.240

Ht2

4,529

633

2,954

3,587

0.2080

1.263

Ki3

5,131

526

3,871

4,397

0.1431

1.167

Li6

4,360

459

3,306

3,765

0.1365

1.158

Oe1

7,983

797

5,866

6,663

0.1654

1.198

Ov1

7,988

772

6,221

6,993

0.1246

1.142

Re3*

2,650

374

906

1,280

0.5170

2.070

Re4*

11,298

2,162

5,306

7,468

0.3390

1.309

Sk1

4,406

714

2,130

2,844

0.3545

1.549

Sm1

4,434

465

3,363

3,828

0.1367

1.158

Sp1

4,389

964

2,059

3,023

0.3112

1.452

St1

4,498

695

2,791

3,486

0.2250

1.290

Te2

8,057

1,134

5,228

6,362

0.2104

1.266


* Includes forward and reverse reads for some clones

Lee et al. BMC Genomics 2010 11:278   doi:10.1186/1471-2164-11-278

Open Data