Table 1

Length and percentage of duplicated fragments up to 500 bp

Genome

Genome

length (kbp)

Duplication

length (kbp)a

% of dupl. fragments in genome

Minimal dupl.

length (kbp)b

Maximal dupl.

length (kbp)b

Median dupl. length (kbp)

Number of dupl. fragments

Genome length

without duplication (kbp)


NA

701.046

163.899

23.4%

0.60

120.0

5.316

8

537.147

NB

569.630

49.407

8.7%

0.54

17.0

8.183

6

520.223

CMS-C

739.719

232.947

31.5%

5.70

105.0

31.009

6

506.772

CMS-S

557.162

45.023

8.1%

0.72

17.0

4.589

8

512.139

CMS-T

535.825

25.884

5.3%

2.60

12.8

5.270

4

509.941

parvi

680.603

143.928

21.2%

0.60

55.0

8.207

8

536.675

lux

539.368

18.561

3.4%

1.70

10.1

6.737

3

517.175

per

570.354

53.719

9.3%

6.30

13.6

11.809

5

520.807


aAll duplicated copies less one

bLength of one copy

Darracq et al. BMC Genomics 2010 11:233   doi:10.1186/1471-2164-11-233

Open Data