Table 3

Gene ontology (GO) categories significantly overrepresented in bovine copy number variations

Group

GO Term

Count

P-value


Gene

cytoplasm

73

7.62E-10

intracellular part

95

7.74E-09

cytoplasmic part

52

9.79E-08

intracellular organelle

81

3.74E-07

organelle

81

3.74E-07

intracellular

100

3.76E-07

developmental process

31

2.14E-06

intracellular membrane-bound organelle

70

3.87E-06

membrane-bound organelle

70

3.93E-06

binding

130

5.64E-06

cell differentiation

22

1.70E-05

cellular developmental process

22

1.70E-05

negative regulation of cellular process

16

2.27E-05

multicellular organismal development

22

4.24E-05

regulation of apoptosis

12

4.28E-05

regulation of programmed cell death

12

4.87E-05

negative regulation of biological process

16

5.02E-05

intracellular organelle part

40

5.89E-05

cell development

17

6.14E-05

organelle part

40

6.36E-05

protein binding

61

8.41E-05

apoptosis

14

1.06E-04

programmed cell death

14

1.17E-04

biological regulation

47

1.72E-04

organelle membrane

22

1.90E-04

regulation of cellular process

41

2.02E-04

death

14

2.37E-04

cell death

14

2.37E-04

regulation of biological process

43

2.62E-04

DNA replication

8

2.67E-04

multicellular organismal process

25

6.73E-04

calmodulin binding

6

7.07E-04

anatomical structure development

17

8.08E-04

cell cycle

12

9.23E-04


Nearby gene

multicellular organismal process

19

6.90E-07

regulation of biological quality

11

2.98E-05

cell morphogenesis

6

5.63E-04

cellular structure morphogenesis

6

5.63E-04

cellular morphogenesis during differentiation

4

7.67E-04


Bae et al. BMC Genomics 2010 11:232   doi:10.1186/1471-2164-11-232

Open Data