Conservation of both binding site and target genes between Fusarium and yeast. We found 2573 genes out of total 13332 Fg genes (19%) with orthologous pairs in Sc by BLAST program (1e-5). Similarly, we found 2378 Fg genes (18%) with orthologous pair in Sp. We checked the presence of our motifs enrichment in the functional sets of genes identified through previous studies (references in the last column) or by their sequence similarity to transcription factors (Figure 4). * indicates that the corresponding motif is also the most significantly enriched motif among all discovered degenerate motifs for the set.
Kumar et al. BMC Genomics 2010 11:208 doi:10.1186/1471-2164-11-208