Table 1

Presence of regions of difference in Dutch clinical isolates from 1993 to 2004

Region of difference

BP-number

No. of

genes

Size

ptxP1 lineage

ptxP3 lineage



Locus:

(kb)


RD-3

BP0910A-BP0937

23

24.9

0% (17)

0% (26)


RD-5

BP1135-BP1141

7

8.6

0% (17)

0% (26)


RD-6

BP1158-BP1176

19

18.7

94% (17)

100% (26)


RD-27

BP1553

1

0.8

82% (17)

100% (26)


RD-10

BP1948-BP1966

18

22.7

100% (27)

0% (53)


RD-28

BP2122-BP2123

2

1.7

94% (17)

100% (26)


RD-29

BP2822-BP2839

17

16.9

94% (17)

100% (26)


RD-18

BP3314-BP3322

9

9.4

94% (17)

92% (26)


RD-1*

BP0515-BP0516

2

1

0% (17)

13% (32)


Regions of difference (RDs) are numbered according to Brinig et al [23]. RD-1* is part of RD-1 as was found by Brinig et al [23]. The percentage of strains harbouring the region and the number of strains analyzed are indicated. Size, refers to the size of the deletion.

King et al. BMC Genomics 2010 11:196   doi:10.1186/1471-2164-11-196

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