Research article  

Transcriptome sequencing of field pea and faba bean for discovery and validation of SSR genetic markers

Sukhjiwan Kaur, Luke W Pembleton, Noel OI Cogan, Keith W Savin, Tony Leonforte, Jeffrey Paull, Michael Materne, John W Forster BMC Genomics 2012, 13:104 (20 March 2012)

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Research article  

Transcriptome analysis reveals the time of the fourth round of genome duplication in common carp (Cyprinus carpio)

Jin-Tu Wang, Jiong-Tang Li, Xiao-Feng Zhang, Xiao-Wen Sun BMC Genomics 2012, 13:96 (19 March 2012)

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Research article  

SNP markers retrieval for a non-model species: a practical approach

Arwa Shahin, Thomas van Gurp, Sander A Peters, Richard GF Visser, Jaap M van Tuyl, Paul Arens BMC Research Notes 2012, 5:79 (29 January 2012)

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Research article  

Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq

Chao Feng, Ming Chen, Chang-jie Xu, Lin Bai, Xue-ren Yin, Xian Li, Andrew C Allan, Ian B Ferguson, Kun-song Chen BMC Genomics 2012, 13:19 (13 January 2012)

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Research article  

A de novo transcriptome of the Asian tiger mosquito, Aedes albopictus, to identify candidate transcripts for diapause preparation

Monica F Poelchau, Julie A Reynolds, David L Denlinger, Christine G Elsik, Peter A Armbruster BMC Genomics 2011, 12:619 (20 December 2011)

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Research article  

De novo assembly and characterization of a maternal and developmental transcriptome for the emerging model crustacean Parhyale hawaiensis

Victor Zeng, Karina E Villanueva, Ben S Ewen-Campen, Frederike Alwes, William E Browne, Cassandra G Extavour BMC Genomics 2011, 12:581 (25 November 2011)

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Research article  

Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum)

Joanne R Russell, Micha Bayer, Clare Booth, Linda Cardle, Christine A Hackett, Pete E Hedley, Linzi Jorgensen, Jenny A Morris, Rex M Brennan BMC Plant Biology 2011, 11:147 (28 October 2011)

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Research  

Reptilian-transcriptome v1.0, a glimpse in the brain transcriptome of five divergent Sauropsida lineages and the phylogenetic position of turtles

Athanasia C Tzika, Raphaël Helaers, Gerrit Schramm, Michel C Milinkovitch EvoDevo 2011, 2:19 (26 September 2011)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

Research article  

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

Wenliang Wei, Xiaoqiong Qi, Linhai Wang, Yanxin Zhang, Wei Hua, Donghua Li, Haixia Lv, Xiurong Zhang BMC Genomics 2011, 12:451 (19 September 2011)

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Research article  

De novo assembly and characterization of the carrot transcriptome reveals novel genes, new markers, and genetic diversity

Massimo Iorizzo, Douglas A Senalik, Dariusz Grzebelus, Megan Bowman, Pablo F Cavagnaro, Marta Matvienko, Hamid Ashrafi, Allen Van Deynze, Philipp W Simon BMC Genomics 2011, 12:389 (2 August 2011)

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Research article  

Transcriptome characterization and polymorphism detection between subspecies of big sagebrush (Artemisia tridentata)

Prabin Bajgain, Bryce A Richardson, Jared C Price, Richard C Cronn, Joshua A Udall BMC Genomics 2011, 12:370 (18 July 2011)

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Database  

EuroPineDB: a high-coverage web database for maritime pine transcriptome

Noé Fernández-Pozo, Javier Canales, Darío Guerrero-Fernández, David P Villalobos, Sara M Díaz-Moreno, Rocío Bautista, Arantxa Flores-Monterroso, M Ángeles Guevara, Pedro Perdiguero, Carmen Collada, M Teresa Cervera, Álvaro Soto, Ricardo Ordás, Francisco R Cantón, Concepción Avila, Francisco M Cánovas, M Gonzalo Claros BMC Genomics 2011, 12:366 (15 July 2011)

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Research article  

Short read Illumina data for the de novo assembly of a non-model snail species transcriptome (Radix balthica, Basommatophora, Pulmonata), and a comparison of assembler performance

Barbara Feldmeyer, Christopher W Wheat, Nicolas Krezdorn, Björn Rotter, Markus Pfenninger BMC Genomics 2011, 12:317 (16 June 2011)

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