Figure 5.

Promoter analysis of the HINATA_NFKB_UP and HANSON_NFKAPPB_IND gene signatures using 105 re-samples for estimations of PE and PP. Results for the HINATA_NFKB_UP signature using A) the -1500,+500 portions of the promoters and B) using phylogenic foot printing and the -5000,+1000 portions of the promoters. Results for the HANSON_NFKAPPB_IND signature using C) the -1500,+500 portions of the promoters and D) using phylogenic foot printing and the -5000,+1000 portions of the promoters. NFKB related motifs in red. All signature designations as in MSigDB.

Veerla et al. BMC Genomics 2010 11:145   doi:10.1186/1471-2164-11-145
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