Table 3

Support values from the various analyses for nodes A-M as indicated in Fig. 2

A

B

C

D

E

F

G

H

I

J

K

L

M


nt

ML

100

92

65

72

98

100

100

100

98

100

100

100

59

MLTN

100

93

66

71

98

100

100

100

98

100

100

100

57

MLB

100

95

64

66

99

100

100

100

97

100

100

100

63

MB

1

1

1

1

1

1

1

1

1

1

1

1

1

PB

1

-

-

0.98

0.92

1

1

1

1

1

1

1

0.9


aa

ML

100

99

96

66

99

100

100

100

51

100

100

100

-

MLB

100

100

98

58

99

100

100

100

55

100

100

100

-

MB

1

1

1

1

1

1

1

1

0.54

1

1

1

-

PBC

1

0.73

-

0.99

0.99

1

0.99

1

-

1

1

1

-

PBM

1

1

-

1

1

1

1

1

0.95

1

1

1

0.84


The values given are for expected likelihood weights of local rearrangements (LR-ELW), bootsrap, and Bayesian posterior probabilities (BPP). ML: maximum likelihood LR-ELW; MLTN: ML LR-ELW for analyses where 2nd codon positions were analyzed under the TN+I+Γ model; MLB: ML bootstrap; MB: BPP for analyses performed with MrBayes; PB: BPP for analyses performed with PhyloBayes (CAT-GTR for nucleotides); PBC: BPP for PB analyses using CAT-Poisson model; PBM: BPP for PB analyses using the mtREV+I+Γ model. nt: nucleotide analyses; aa: amino acid analyses.

Douglas and Gower BMC Genomics 2010 11:14   doi:10.1186/1471-2164-11-14

Open Data