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Open Access Research article

Comparative analysis of fungal protein kinases and associated domains

Idit Kosti1, Yael Mandel-Gutfreund1, Fabian Glaser2* and Benjamin A Horwitz1*

Author Affiliations

1 Department of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel

2 Bioinformatics Knowledge Unit, The Lorry I. Lokey Interdisciplinary Center for Life Sciences and Engineering, Technion - Israel Institute of Technology, Haifa 32000, Israel

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BMC Genomics 2010, 11:133  doi:10.1186/1471-2164-11-133

Published: 24 February 2010

Additional files

Additional File 1:

Total predicted number of kinases per fungal species. Bar colors indicate significantly different kinome size (see text for details).

Format: EPS Size: 842KB Download file

Open Data

Additional File 2:

Pipeline for kinome analysis. This file contains the pipeline software and documentation.

Format: RAR Size: 568KB Download file

Open Data

Additional File 3:

Phylogenetic tree of the Aspergillus nidulans kinome. Taxa names are composed of the predicted kinase group followed by an underscore and the protein code as it appears in the original proteome. Simulated bootstrapped values are also shown.

Format: EPS Size: 9.5MB Download file

Open Data

Additional File 4:

Domain percentage data used as input for the PCA analysis. The first column lists the species names, abbreviated according to Table 1. The values are the percentages of the domains indicated in each column, according to PFAM notation.

Format: PNG Size: 178KB Download file

Open Data