Table 1

Summary of ESTs from Oldenlandia affinis leaf cDNA library

Length

No. ESTs

%

Cumulative %


Minimum sequence length

105 bp

Average sequence length

624 bp

Maximum sequence length

926 bp

length > 900 bp

4

0.3%

length at 800-899 bp

165

14.8%

15.1%

length at 700-799 bp

372

33.3%

48.4%

length at 600-699 bp

136

12.2%

60.6%

length at 500-599 bp

162

14.5%

75.1%

length at 400-499 bp

119

10.7%

85.8%

length at 300-399 bp

76

6.8%

92.6%

length at 200-299 bp

48

4.3%

96.9%

length at 100-199 bp

35

3.1%

100.0%


Total No. high-quality ESTs

1,117*


*Raw sequences were automatically trimmed using SeqMan (DNASTAR). After editing only clones above 100 bp in length were retrieved.

Qin et al. BMC Genomics 2010 11:111   doi:10.1186/1471-2164-11-111

Open Data