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This article is part of the supplement: Proceedings of the Avian Genomics Conference and Gene Ontology Annotation Workshop

Open Access Proceedings

A bacterial artificial chromosome library for the Australian saltwater crocodile (Crocodylus porosus) and its utilization in gene isolation and genome characterization

Xueyan Shan1, David A Ray2, John A Bunge3 and Daniel G Peterson14*

Author Affiliations

1 Mississippi Genome Exploration Laboratory (MGEL), Department of Plant and Soil Sciences, Mississippi State University, Mississippi State, MS, USA

2 Department of Biology, West Virginia University, Morgantown, WV, USA

3 Department of Statistical Science, Cornell University, Ithaca, NY, USA

4 Life Sciences & Biotechnology Institute; Institute for Digital Biology, Mississippi State University, Mississippi State, MS, USA

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BMC Genomics 2009, 10(Suppl 2):S9  doi:10.1186/1471-2164-10-S2-S9

Published: 14 July 2009

Additional files

Additional file 1:

Table S1. Consensus sequences of highly conserved portions of crocodilian CR1a and CR1b subfamily elements. Table S2. Putative C-mos CDS for platypus mined from the current genome assembly amended so that the two overlapping but out of frame ORFs are combined into a single presumed C-mos CDS. Figure S1. MUSCLE-based nucleotide alignment of the complete coding sequences of A. carolinensis, C. porosus, G. gallus, and T. guttata C-mos genes. Figure S2. MUSCLE-based amino acid alignment of the complete coding sequences of A. carolinensis, C. porosus, G. gallus, and T. guttata C-mos genes.

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