Table 1

Regulatory rules learned by the Splitting approach

20 min

40 min

70 min

100 min

Rule

p-value

Rule

p-value

Rule

p-value

Rule

p-value

Mbp1

10^-31

Swi4

10^-17

Mcm1 ∩ Ndd1

10^-25

Mbp1

10^-20

Mbp1 ∩ Swi6

10^-26

Mth1 ∩ Swi4

10^-11

Fkh2

10^-21

Swi4

10^-18

Stb1 ∩ Swi4

10^-15

Fkh2

10^-10

Ndd1

10^-17

Swi4 ∩ Swi6

10^-14

Swi4 ∩ Swi6

10^-9

Fkh1 ∩ Fkh2

10^-6

Fkh2 ∩ Ndd1

10^-15

Ste12 ∩ Swi4

10^-8

Swi4

10^-7

Met4

10^-5

Fkh1 ∩ Ndd1

10^-6

Hir2 ∩ Swi4

10^-5

Mbp1 ∩ Swi4

10^-6

Fkh2 ∩ Msn1

10^-5

Fkh1 ∩ Fkh2

10^-4

Mbp1 ∩ Mss11

10^-5

Dot6 ∩ Mbp1

10^-5

Hsf1

10^-5

Mcm1

10^-4

Ace2 ∩ Swi5

10^-5

Ash1 ∩ Mbp1

10^-5

Met4 ∩ Met31

10^-5

Nrg1 ∩ Smp1

10^-3

Mbp1 ∩ Stb1

10^-5

Ecm22 ∩ Mbp1

10^-3

Met4 ∩ Cbf1

10^-5

Swi5

10^-4

Ruan et al. BMC Genomics 2009 10(Suppl 1):S8   doi:10.1186/1471-2164-10-S1-S8