Table 4

Sequences expressed primarily in larvae†.

Contig

Total reads

Larval reads

% L reads

Match

Annotation


Larval Cuticle Proteins

17158 [EZ133377], 24176 [EZ140395], 9309 [125528]

175

173

99

CG32400

Larval cuticular protein 65Ab1

17157 [EZ133376]

38

37

97

CG6956

Larval cuticular protein 65Ac

9308 [EZ125527], 9306 [EZ125525]

177

171

97

CG2044

Larval cuticular protein 4

22477 [EZ138696]

29

28

97

CG15515

Cuticle protein

11180 [EZ127399]

82

79

96

CG9070

Larval cuticular protein 2a

21675 [EZ137894], 24313 [EZ140532]

308

290

94

CG8697

Larval cuticle protein 2

17322 [EZ133541]

34

32

94

CG9077

Cuticular protein 47Ec

20182 [EZ136401]

95

83

87

CG8502

Cuticular protein 49Ac

Protein Digestion

23604 [EZ139823]

36

36

100

CG12385

theta-Trypsin

24013 [EZ140232]

48

46

96

CG12385

theta-Trypsin

10762 [EZ126981]

89

85

96

CG12385

theta-Trypsin

21083 [EZ137302]

54

49

91

CG17571

trypsin-like serum protease

9347 [EZ125566]

120

108

90

CG30028

gammaTrypsin

9544 [EZ125763]

79

70

89

CG12385

theta Trypsin

22598 [EZ138817]

20

17

85

CG12387

zeta Trypsin


†"Contig" is our assembly number followed by the GenBank TSA accession number, "total reads" is the total number of reads contributing to the contig, "larval reads" is the number of the total recovered from larvae, "%L" is the percent of reads from larvae, "Match" is the Celera Genome number of the best match with Drosophila melanogaster, and "Annotation" is a brief description of the match.

Schwarz et al. BMC Genomics 2009 10:633   doi:10.1186/1471-2164-10-633

Open Data