Research article
Computational prediction of splicing regulatory elements shared by Tetrapoda organisms
-
* Corresponding author: Alexander Churbanov atchourb@nmsu.edu
1 New Mexico State University, Biology Dept., MSC 3AF, PO Box 30001, Las Cruces, NM 88003, USA
2 University of Southampton, Southampton University Hospital, MP808, Tremona Road, Southampton SO16 6YD, UK
3 Loyola University Medical Center, 2160 S. First Ave., Maywood, IL 60153, USA
BMC Genomics 2009, 10:508 doi:10.1186/1471-2164-10-508
Published: 4 November 2009Additional files
Additional file 1:
Report and analysis of splicing regulatory elements found. Contains list of all the elements found along with their statistical significance and overlap between their groups. Functional analysis for these elements in context of alternative splicing constructs is reported. We provided brief description for an unsupervised clustering method used to group the elements found and grouped the elements within possible functional motifs. We also report elements found for primates and outgroup. Subset of novel elements is reported.
Format: PDF Size: 450KB Download file
This file can be viewed with: Adobe Acrobat Reader
