Table 5

SNP performance statistics.

SNP performance

384 selected SNPs

Mapped (343)

%

Unmapped (41)

%


polymorphic

304

88.6

20

48.8

monomorphic

12

3.5

4

9.8

not working

27

7.9

17

41.5


Genotyping performance of 343 SNP discovered in short read contigs that were uniquely mapped on the chicken genome and 41 SNPs discovered in contigs that were not, or not uniquely, mapped on the chicken genome.

Kerstens et al. BMC Genomics 2009 10:479   doi:10.1186/1471-2164-10-479

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