Research article
Epigenetic regulation of the honey bee transcriptome: unravelling the nature of methylated genes
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* Corresponding author: Ryszard Maleszka Ryszard.Maleszka@anu.edu.au
1 Centre for Bioinformation, Mathematical Sciences Institute, The Australian National University, Canberra ACT 0200, Australia
2 Research School of Biology, The Australian National University, Canberra ACT 0200, Australia
BMC Genomics 2009, 10:472 doi:10.1186/1471-2164-10-472
Published: 14 October 2009Additional files
Additional file 1:
Proportion of cDNA spots found expressed on each array and for each channel in different experiment. This PDF displays a graph expressing Proportion of cDNA spots found expressed on each array and for eachchannel in different experiment.
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Additional file 2:
The correlation between ubiquitous genes and low CpG o/e ratio holds at different thresholds at which genes are considered expressed in microarray experiments. The columns show three different thresholds for gene presence/absence calls. The first column lists three different questions, the null hypotheses are the "No" answers to these questions. The p-values for the rejection of the null hypotheses are reported in each cell.
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Additional file 3:
Summary of the types and number of features present on the honey bee oligonucleotide array. This word document contains a table expressing Summary of the types and number of features present on the honey bee oligonucleotide array.
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Additional file 4:
Gene ontology. Supplementary methods: Gene Ontology, Primers for bisulfite sequencing, Array methodology.
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