Comparative SNP diversity among four Eucalyptus species for genes from secondary metabolite biosynthetic pathways
-
* Corresponding author: Carsten Külheim carsten.kulheim@anu.edu.au
1 Research School of Biology, Australian National University, 116 Daley Road, Canberra, Australia
2 Department of Botany, Ruhr Universität, Bochum, German
BMC Genomics 2009, 10:452 doi:10.1186/1471-2164-10-452
Published: 24 September 2009Additional files
Additional file 1:
Table of the gene copy number from A. thaliana, O. sativa, P. trichocarpa and V. vinifera. Values estimated from BLAST searches and searches with the gene names. Values in brackets are unconfirmed genes or pseudogenes. The shading of the gene name indicates genes with a high copy number.
Format: DOC Size: 46KB Download file
This file can be viewed with: Microsoft Word Viewer
Additional file 2:
pN/pS for each gene and species studied. This file shows the values for non-synonymous SNPs per non-synonymous site divided by synonymous SNPs per synonymous sites (pN/pS) for each species
Format: DOC Size: 50KB Download file
This file can be viewed with: Microsoft Word Viewer
Additional file 3:
Primer list for the set of 23 genes used in this study. This file shows the primers used for each gene, the EST used for designing the primer and the length of each fragment amplified by the primer pair.
Format: XLS Size: 26KB Download file
This file can be viewed with: Microsoft Excel Viewer
