Table 2

Enrichment or reduction of GO groups with respect to stumpy forms

Comparison

Enriched with respect to Stumpy

Reduced with respect to Stumpy


Slender relative to T0

protein-DNA complex assembly, various other chromatin-related terms

anion channel activity

T1 relative to T0

RNA transport, translation regulation

endonuclease activity

T6 relative to T0

translation, signalling, calmodulin binding, hexose transport

cell adhesion

T18 relative to T0

oxido-reductase activity

cell signalling (cyclase activity)

T48 relative to T0

trans-splicing, translation

anion channel activity


Enrichment of particular GO groups were assessed, using a hypergeometric test, to determine whether the GO terms attached to each individual gene were overrepresented relative to all genes (and their associated GO terms) present on the arrays. The enrichment of GO terms in genes up- and down-regulated during different periods of differentiation are shown.

Kabani et al. BMC Genomics 2009 10:427   doi:10.1186/1471-2164-10-427

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