BMC Genomics

official impact factor 4.21

Open Access Highly Access Research article

A physical map of the papaya genome with integrated genetic map and genome sequence

Qingyi Yu1, Eric Tong1, Rachel L Skelton1, John E Bowers2, Meghan R Jones1, Jan E Murray1,3, Shaobin Hou4, Peizhu Guan5, Ricelle A Acob5, Ming-Cheng Luo6, Paul H Moore7, Maqsudul Alam4, Andrew H Paterson2 and Ray Ming1,3*

Author Affiliations

1 Cellular and Molecular Biology Research Unit, Hawaii Agriculture Research Center, Aiea, HI 96701, USA

2 Plant Genome Mapping Laboratory, University of Georgia, Athens, GA 30602, USA

3 Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA

4 Center for Advanced Studies in Genomics, Proteomics and Bioinformatics, University of Hawaii, Honolulu, HI 96822, USA

5 Department of Molecular Bioscience and Bioengineering, University of Hawaii, Honolulu, HI 96822, USA

6 Department of Plant Sciences, University of California, Davis, CA 95616, USA

7 USDA-ARS, Pacific Basin Agricultural Research Center, Hilo, HI 96720, USA

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BMC Genomics 2009, 10:371 doi:10.1186/1471-2164-10-371

Published: 7 August 2009

Additional files

Additional file 1:

The detailed information of the initial integrated map of linkage group 1.

Format: XLS Size: 25KB Download file

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Additional file 2:

The detailed information of the final integrated map of linkage group 1.

Format: XLS Size: 33KB Download file

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Additional file 3:

The detailed information of the integrated genetic and physical map.

Format: XLS Size: 92KB Download file

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Additional file 4:

Summary of the physical sizes of selected FPC contigs to estimate the average band size in FPC map.

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Additional file 5:

The FPC contigs were aligned on the genetic map. The numerical scale at the left of each linkage group is the cumulative length of the LG in centiMorgans. The pink boxes represent FPC contigs. The blue lines highlight the recombination suppression regions and the green lines highlight the recombination hotspots.

Format: DOC Size: 377KB Download file

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