BMC Genomics

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Open Access Highly Access Database

MicroPC (μPC): A comprehensive resource for predicting and comparing plant microRNAs

Wuttichai Mhuantong* and Duangdao Wichadakul

Author Affiliations

Information Systems Laboratory, National Center for Genetic Engineering and Biotechnology (BIOTEC),113 Thailand Science Park, Phaholyothin Road, Klong 1, Klong Luang, Pathumthani, Thailand

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BMC Genomics 2009, 10:366 doi:10.1186/1471-2164-10-366

Published: 7 August 2009

Additional files

Additional file 1:

List of plant species and their miRNAs obtained from miRBase (release 12.0).

Format: PDF Size: 28KB Download file

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Open Data

Additional file 2:

List of excluded miRBase sequences and their secondary structures.

Format: PDF Size: 3.3MB Download file

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Open Data

Additional file 3:

List of plant species and their EST sequences obtained from PlantGDB (November, 2008)

Format: PDF Size: 126KB Download file

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Open Data

Additional file 4:

The miRNA prediction results for the known 936 precursor miRNA sequences from miRBase and the one thousand repeats of 936 random sequences.

Format: PDF Size: 18KB Download file

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Open Data

Additional file 5:

The numbers of plant species of each miRNA family obtained from miRBase.

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Open Data

Additional file 6:

The numbers of correctly predicted precursor miRNAs from miRBase according to the leave-one-out of source mature miRNA sequences.

Format: PDF Size: 15KB Download file

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Open Data