Table 1

The silkworm OBP genes family

New name

Previous name

Scaffold ID

Chromosome

Annotation

Probe

Expression


BmorOBP1

BmorGOBP1

nscaf3052

19

BGIBMGA012611

sw04017

An1

BmorOBP2

BmorGOBP2

nscaf3052

19

BGIBMGA012614

sw15189

An1

BmorOBP3

BmorPBP1

nscaf3052

19

BGIBMGA012615

sw09490

An6

BmorOBP4

nscaf3052

19

BGIBMGA012616*

sw09491

BmorOBP5

nscaf3052

19

BmorOBP6

nscaf3052

19

BGIBMGA012617

sw01959

BmorOBP7

nscaf2902

18

BGIBMGA008356*

sw11831†

BmorOBP8

nscaf2902

18

BGIBMGA008355*

sw11831†

Mg2

BmorOBP9

Mg2, Ep7

BmorOBP10

nscaf2902

18

BmorOBP11

nscaf2902

18

BGIBMGA008354

sw22119

Mg100

BmorOBP12

nscaf2902

18

Mg12

BmorOBP13

nscaf2902

18

BGIBMGA008353*

sw15408

Mg3

BmorOBP14

nscaf2902

18

sw15407

An1

BmorOBP15

nscaf2902

18

BGIBMGA008352*

sw21849

BmorOBP16

nscaf2902

18

BmorOBP17

nscaf2902

18

BGIBMGA008351

BmorOBP18

nscaf2902

18

BGIBMGA008474

BmorOBP19

nscaf2902

18

sw13149†

BmorOBP20

BmorABPX

nscaf2330

26

BGIBMGA002308

sw00604

BmorOBP21

nscaf2674

5

BGIBMGA003463*

BmorOBP22

nscaf2529

5

BGIBMGA002630

Em1

BmorOBP23

nscaf2529

5

BGIBMGA002629

sw03370

Mg37, Sm2, Wd1

BmorOBP24

nscaf2529

5

BGIBMGA002628

sw12016

BmorOBP25

nscaf2529

5

BGIBMGA002627

sw20121†

BmorOBP26

nscaf2529

5

BGIBMGA002666*

sw20121†

Mg1

BmorOBP27

nscaf2529

5

BGIBMGA002626

sw20121†

Sp3, Sm3, An3, Mt1, Fs1, Bp1, Mi2, Wd10, Te1

BmorOBP28

scaffold896

BmorOBP29

nscaf2983

7

BGIBMGA010039*

sw15978

Te2, Fp1

BmorOBP30

nscaf2983

7

BGIBMGA010011*

sw04366†

Bp1

BmorOBP31

nscaf2983

7

BGIBMGA010010

sw15426

Ce2, Bs8, Bp24

BmorOBP32

nscaf2943

14

BGIBMGA009290*

sw00262

Pb1, He1

BmorOBP33

nscaf2943

14

BGIBMGA009291

BmorOBP34

nscaf2943

14

BGIBMGA009292*

BmorOBP35

nscaf2943

14

BmorOBP36

nscaf2948

14

BGIBMGA009352*

sw14581

BmorOBP37

nscaf2948

14

BGIBMGA009366*

sw05807

BmorOBP38

nscaf3063

16

BGIBMGA013247

sw14065

Mg4

BmorOBP39

nscaf1681

22

BGIBMGA000225*

sw00870

EP1

BmorOBP40

nscaf3026

23

BGIBMGA011298*

sw11835

Fl2

BmorOBP41

nscaf3026

23

BGIBMGA011276*

sw11149

Ov5, Ep1

BmorOBP42

nscaf3027

23

BGIBMGA011433

sw20434

Mg2

BmorOBP43

nscaf3027

23

BGIBMGA011432*

sw03198

Ov6, Fs3, fl3, fp2

BmorOBP44

nscaf2993

12

BGIBMGA010425

sw09301

Fp3


This table lists the nomenclature, accession numbers, ID, Chromosome, array probe and expression of all 42 odorant binding-like protein genes identified in this study. We have modified annotations to some of the BmOBP genes as indicated by the asterisk. four probes with approximately 20 bases mismatched to the gene sequences are marked with a cross mark. The tissue type of EST data was indicated using abbreviations: Mg (maxillary galea), Sm (middle silkgland), Sp (posterior silkgland), Wd (wing disk), Mt (Malpighian tubule), Fl (Fat body), Mi (Midgut), Te (Testis), He (Hemocyte), Ep (Epidermis) (5th instar larva day 3), Fp (Fat body, pupa 0), Fs (Fat body, spinning 2), Ov (Ovary, spinning stage day-0, day-3), Ce (compound eye, mixed stages from 5th instar larva to pupa), Bs (Brain, mixed stages from day three 5th instar to S3), Bp (Brain, a mixture of pupal stages after P1, just after pupation), An (antenna, adult moth), Em (Embryo, 72 hours), Pb (whole mid-stage pupae without the cuticle). The number of EST is appended to the tissue type.

Gong et al. BMC Genomics 2009 10:332   doi:10.1186/1471-2164-10-332

Open Data