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Open Access Highly Accessed Research article

Comparative genomics of Enterococcus faecalis from healthy Norwegian infants

Margrete Solheim1*, Ågot Aakra1, Lars G Snipen2, Dag A Brede1 and Ingolf F Nes1

Author Affiliations

1 Laboratory of Microbial Gene Technology and Food Microbiology, Department of Chemistry, Biotechnology and Food Science, The Norwegian University of Life Sciences, N-1432 Ås, Norway

2 Section for Biostatistics, Department of Chemistry, Biotechnology and Food Science, The Norwegian University of Life Sciences, N-1432 Ås, Norway

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BMC Genomics 2009, 10:194  doi:10.1186/1471-2164-10-194

Published: 24 April 2009

Additional files

Additional File 1:

Primers used in this study. A table of primers used in this study.

Format: XLS Size: 30KB Download file

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Additional File 2:

Genotypic and phenotypic characteristics of E. faecalis baby isolates. A table of the results from the phenotypic- and genotypic assays conducted in this study.

Format: XLS Size: 33KB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional File 3:

Genes divergent in all the baby isolates. A table of genes that were classified as divergent in all the baby isolates analyzed by CGH.

Format: DOC Size: 110KB Download file

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Additional File 4:

Fermentation patterns from API 50 CH assays. A table of results from fermentation profiling of selected E. faecalis baby isolates by API 50 CH.

Format: XLS Size: 26KB Download file

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Open Data

Additional File 5:

The phylogenomic relationship of E. faecalis isolates based on gene content, as detected by CGH. A phylogenetic tree based on CGH data from the present study, in addition to previously published CGH data from the literature.

Format: PNG Size: 115KB Download file

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Additional File 6:

Core variable genes. A table of genes that were classified as core variable by CGH.

Format: DOC Size: 197KB Download file

This file can be viewed with: Microsoft Word Viewer

Open Data