Table 4

Top 30 genes upregulated in CT blastocysts and donor cells compared to IVF blastocysts, sorted by P-value

Probe set ID

Gene Title

Gene ID

P value

Fold change CT1/IVF

Fold change CT4/IVF


Bt.8933.1.S1_at

Adaptor-related protein complex 3, sigma 2

AP3S2

0.0001

1.61

2.21

Bt.27382.1.A1_s_at

X-ray repair complementing defective repair in Chinese hamster cells 1

XRCC1

0.0001

2.60

2.54

Bt.22224.1.S1_at

insulin receptor substrate 4

IRS4

0.0002

2.31

2.10

Bt.3220.1.S1_at

Crystallin, lambda 1

CRYL1

0.0003

1.94

1.82

Bt.7805.2.S1_a_at

Nuclear casein kinase and cyclin-dependent kinase substrate 1

NUCKS1

0.0003

3.14

3.47

Bt.29540.1.S1_at

Arginine/serine-rich coiled-coil 1

RSRC1

0.0004

1.57

3.09

Bt.19690.1.A1_at

Paraoxonase 1

PON1

0.0005

1.53

3.74

Bt.20444.1.S1_at

thyroid hormone receptor associated protein 5

THRAP

0.0006

1.60

1.20

Bt.16122.1.S1_at

Sorbitol dehydrogenase

SORD

0.0008

2.59

3.40

Bt.5737.1.S1_at

vacuolar protein sorting 26 homolog A

VPS26

0.0008

2.33

3.38

Bt.4292.1.S1_at

ARP3 actin-related protein 3 homolog (yeast)

ACTR3

0.0008

1.69

1.69

Bt.18230.1.S1_a_at

Nuclear autoantigenic sperm protein

NASP

0.0011

1.95

2.75

Bt.9107.1.S1_a_at

phosphatidylinositol binding clathrin assembly protein

PIBCAP

0.0014

1.83

2.93

Bt.663.1.S1_at

Palladin, cytoskeletal associated protein

PALLD

0.0019

2.88

3.08

Bt.1743.2.S1_a_at

Phenylalanyl-tRNA synthetase 2, mitochondrial

FARS2

0.0021

1.64

2.98

Bt.13205.1.A1_at

Mitochondrial ribosomal protein S35

MRPS35

0.0023

1.44

2.29

Bt.25100.1.A1_at

Cortactin

CTTN

0.0026

1.26

1.58

Bt.783.1.S1_at

Aldehyde oxidase 1

AOX1

0.0029

1.99

3.67

Bt.23608.1.S1_s_at

Keratin 8

KRT8

0.0030

3.99

4.59

Bt.27284.1.S1_at

Eukaryotic translation initiation factor 4H isoform 2

WBSCR1

0.0038

2.21

1.55

Bt.10898.1.S1_at

Tumor differentially expressed 2-like

TDE2L

0.0041

1.98

5.08

Bt.28745.1.S1_at

Coagulation factor II receptor-like 1

F2RL1

0.0045

2.25

1.85

Bt.5267.1.S1_at

Annexin A6

ANXA6

0.0046

1.92

3.79

Bt.355.1.S1_at

Caldesmon 1

CALD1

0.0047

1.71

1.79

Bt.20084.2.S1_at

Casein kinase 1, epsilon

CSNK1E

0.0053

3.90

2.64

Bt.2823.3.S1_a_at

Chromosome 1 open reading frame 35

C1orf35

0.0058

1.45

1.78

Bt.7671.1.S1_at

Interferon induced transmembrane protein 1

IFITM1

0.0069

2.47

2.60

Bt.5319.1.S1_at

Anti-oxidant protein 2 (independent phospholipase A2)

AOP2

0.0071

2.03

3.70

Bt.23263.1.S1_s_at

Heat shock 90 kDa protein 1, beta

HSP90AB1

0.0072

1.30

1.90

Bt.19709.1.S1_at

LAG1 homolog, ceramide synthase 2

LASS2

0.0072

1.25

1.69


Rodriguez-Osorio et al. BMC Genomics 2009 10:190   doi:10.1186/1471-2164-10-190

Open Data