Table 1

Pairwise alignment results comparing both the NCBI bovine SMARCAL1 protein and the official gene model for SMARCAL1 (GLEAN_20241) to the human SMARCAL1 protein.

Bovine NCBI SMARCAL1 vs. Human SMARCAL1

GLEAN_20241 vs. Human SMARCAL1

Similarity Score

3483

3799

Match

74%

79%

Number of Matches

718

764

Number of Mismatches

208

165

Total Length of Gaps

43

33

The official gene model shows a higher sequence homology to the human protein with more matches, shorter gaps, and fewer mismatches.

Uzun et al. BMC Genomics 2009 10:183   doi:10.1186/1471-2164-10-183