Table 11 |
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|
Putative transcripts for members of the fatty acid binding proteins (fab) family identified in the EST libraries. |
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|
Contig |
EST singnature |
Contig size |
Acession number/Best BLAST match |
Organism |
E value |
MS |
RE |
REH |
FRE |
sbs01 |
sbs02 |
sbs04 |
|
|
||||||||||||
|
bpa-fab-1 |
sb101P0004F07 |
5 |
Q5EBJ0/Fatty acid binding protein 3 |
Mus musculus Mouse |
1E-23 |
1 |
0 |
1 |
3 |
0 |
0 |
0 |
|
|
||||||||||||
|
bpa-fab-2 |
sb101P0022L08 |
10 |
Q90W92/Heart-type fatty acid-binding protein |
Fundulus heteroclitus Killifish |
1E-25 |
1 |
1 |
1 |
5 |
1 |
0 |
1 |
|
|
||||||||||||
|
bpa-fab-3 |
sb104P0003D03 |
3 |
Q5EBJ0/Fatty acid binding protein 3 |
Mus musculus Mouse |
6E-25 |
0 |
0 |
0 |
1 |
0 |
2 |
0 |
|
|
||||||||||||
|
bpa-fab-4 |
sb102P0013H20 |
1 |
A8HG12/Brain-type fatty acid binding protein |
Epinephelus coioides Orange spotted grouper |
6E-18 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
|
|
||||||||||||
|
bpa-fab-5 |
sb103P0024C16 |
9 |
Q5EBJ0/Fatty acid binding protein 3 |
Mus musculus Mouse |
8E-30 |
0 |
0 |
2 |
7 |
0 |
0 |
0 |
|
|
||||||||||||
|
Total |
2 |
2 |
4 |
16 |
1 |
2 |
1 |
|||||
|
|
||||||||||||
|
Signature clones are given for transcripts (concensus sequences) composed of contigs. |
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|
Denekamp et al. BMC Genomics 2009 10:108 doi:10.1186/1471-2164-10-108 |
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