|
Test results for observed data |
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| Data |
SNP |
pgenotype |
pFP |
pallele |
Fcase |
Fcontrol |
|
|
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| AMD |
rs380390 |
0.0380 |
0.0090 |
0.0056 |
0.215 |
-0.073 |
| rs10272438 |
1.0000 |
0.9068 |
0.0194 |
0.733 |
0.611 |
|
|
|
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| AMD HK |
rs10490924 |
0.0002 |
0.0002 |
0.0002 |
0.243 |
-0.062 |
| rs10504152 |
0.0058 |
0.1286 |
0.2222 |
0.132 |
-0.271 |
|
| rs584244 |
0.1824 |
0.0996 |
0.1010 |
-0.011 |
-0.149 |
|
|
|
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| PD |
rs9952724 |
0.0004 |
0.0002 |
1.0000 |
0.788 |
0.022 |
| rs850084 |
0.0022 |
0.0002 |
0.9932 |
0.828 |
0.243 |
|
| rs10963676 |
0.0058 |
0.0004 |
0.0072 |
0.817 |
0.086 |
|
| rs4746675 |
0.0062 |
0.0004 |
1.0000 |
0.839 |
0.048 |
|
| rs557074 |
0.0068 |
0.0012 |
1.0000 |
0.736 |
0.029 |
|
| rs1504212 |
0.0088 |
0.0014 |
1.0000 |
0.494 |
-0.023 |
|
| rs12364577 |
0.0174 |
0.0020 |
1.0000 |
0.519 |
0.014 |
|
| rs1468375 |
0.0240 |
0.0042 |
0.0002 |
0.452 |
-0.040 |
|
|
Results of the genotype, FP, and allele tests applied to three published datasets: AMD in Caucasians [11], AMD HK in data from Hong Kong [15], and PD [16]. Estimated F values based on observed numbers of genotypes in case and control individuals are unrestricted, that is, may be negative. | ||||||
Zhang et al. BMC Genetics 2008 9:42 doi:10.1186/1471-2156-9-42 |
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