|
Estimation of number of probes that respond to target and display an intensity above the background |
||||||
| Probes above background in each sample |
Probes and fragments above background in 5/5 samples |
|||||
|
|
||||||
| Probe count |
Percentage |
Probes # (%) |
Fragment # (%) |
|||
|
|
||||||
| data set 1 |
||||||
|
|
||||||
| Sample1 |
12,017,471 |
97.47% |
11,786,082 |
(95.59%) |
1,329,822 |
(99.96%) |
| Sample2 |
12,025,953 |
97.54% |
||||
| Sample3 |
12,075,266 |
97.94% |
||||
| Sample4 |
12,092,454 |
98.08% |
||||
| Sample5 |
12,080,046 |
97.97% |
||||
|
|
||||||
| data set 2 |
||||||
|
|
||||||
| Sample1 |
11,980,266 |
97.17% |
11,697,525 |
(94.87%) |
1,329,806 |
(99.96%) |
| Sample2 |
12,053,875 |
97.76% |
||||
| Sample3 |
12,056,015 |
97.78% |
||||
| Sample4 |
12,039,968 |
97.65% |
||||
| Sample5 |
11,981,189 |
97.17% |
||||
|
|
||||||
| data set 3 |
||||||
|
|
||||||
| Sample1 |
11,965,896 |
97.05% |
11,687,506 |
(94.79%) |
1,329,818 |
(99.96%) |
| Sample2 |
12,061,150 |
97.82% |
||||
| Sample3 |
12,027,025 |
97.54% |
||||
| Sample4 |
12,060,619 |
97.82% |
||||
| Sample5 |
12,040,767 |
97.66% |
||||
|
Note: Each data set represents a replicate of 1X–5X samples. | ||||||
Shen et al. BMC Genetics 2008 9:27 doi:10.1186/1471-2156-9-27 |
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