Analysis of genetic variation in Ashkenazi Jews by high density SNP genotyping1Departments of Epidemiology and Biostatistics, Memorial Sloan-Kettering Cancer Center, New York, NY, USA 2Surgery, Memorial Sloan-Kettering Cancer Center, New York, NY, USA 3Medicine, Memorial Sloan-Kettering Cancer Center, New York, NY, USA 4Programs in Cancer Biology and Genetics, Memorial Sloan-Kettering Cancer Center, New York, NY, USA 5Molecular Biology, Memorial Sloan-Kettering Cancer Center, New York, NY, USA 6Laboratories of Genomic Diversity, National Cancer Institute, Bethesda, MD, USA 7Population Genetics, National Cancer Institute, Bethesda, MD, USA 8Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY, USA 9Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA 10Chaim Sheba Medical Center, Tel-Hashomer, and Sackler School of Medicine, Tel-Aviv University, Tel-Aviv, Israel 11Department of Medicine, University of Chicago, Chicago, IL, USA
BMC Genetics 2008, 9:14doi:10.1186/1471-2156-9-14
Additional filesAdditional File 1: Table S1. Distribution of SNPs on each chromosome arm Format: EPS Size: 267KB Download file Additional File 2: Figure S1.Percentage of No Calls per SNP by array type Format: EPS Size: 250KB Download file Additional File 3: Figure S2. Percentage of No Calls per SNP by array type for SNPS with completion rate of greater than 99.6% Format: EPS Size: 314KB Download file Additional File 4: Figure S3. Percentage of No Calls per SNP by array type in CEU Format: EPS Size: 242KB Download file Additional File 5: Figure S4. Percentage of No Calls per SNP by array type in CEU Format: EPS Size: 288KB Download file Additional File 6: Figure S5. Analysis of Hardy-Weinberg Departures Format: EPS Size: 458KB Download file Additional File 7: Figure S6. A sliding window plot of average r2 values across chromosome 22. For this analysis, 1.7 Mb windows with a 1.6 Mb overlap were utilized. Format: EPS Size: 232KB Download file Additional File 8: Figure S7. The proportion of SNPs with D' = 1 as a function of distance between SNPs, with data drawn from chromosome 1. Format: EPS Size: 227KB Download file |



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