BMC Genetics

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Whole genome linkage disequilibrium maps in cattle

Stephanie D McKay, Robert D Schnabel, Brenda M Murdoch, Lakshmi K Matukumalli, Jan Aerts, Wouter Coppieters, Denny Crews, Emmanuel D Neto, Clare A Gill, Chuan Gao, Hideyuki Mannen, Paul Stothard, Zhiquan Wang, Curt P Van Tassell, John L Williams, Jeremy F Taylor and Stephen S Moore*

BMC Genetics 2007, 8:74 doi:10.1186/1471-2156-8-74

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BioMed Central: 12 citations

Proceedings   Open Access

XVth QTLMAS: simulated dataset

Jean-Michel Elsen, Simon Tesseydre, Olivier Filangi, Pascale Le Roy, Olivier Demeure BMC Proceedings 2012, 6(Suppl 2):S1 (21 May 2012)

Research   Open Access Highly Accessed

Prediction of a deletion copy number variant by a dense SNP panel

Naveen K Kadri, Patrick D Koks, Theo HE Meuwissen Genetics Selection Evolution 2012, 44:7 (23 March 2012)

Research article   Open Access

Estimates of linkage disequilibrium and effective population size in rainbow trout

Caird E Rexroad, Roger L Vallejo BMC Genetics 2009, 10:83 (14 December 2009)

Research article   Open Access Highly Accessed

High-resolution haplotype block structure in the cattle genome

Rafael Villa-Angulo, Lakshmi K Matukumalli, Clare A Gill, Jungwoo Choi, Curtis P Van Tassell, John J Grefenstette BMC Genetics 2009, 10:19 (24 April 2009)

The haplotype block structure of beef and dairy breeds of cattle are unexpectedly similar and estimates of effective population sizes reflect ancient cattle domestication and more recent population bottlenecks.

Research article   Open Access Highly Accessed

A high density linkage map of the bovine genome

Juan A Arias, Mike Keehan, Paul Fisher, Wouter Coppieters, Richard Spelman BMC Genetics 2009, 10:18 (24 April 2009)

Research article   Open Access

Two-stage genome-wide association study identifies integrin beta 5 as having potential role in bull fertility

Jean M Feugang, Abdullah Kaya, Grier P Page, Lang Chen, Tapan Mehta, Kashif Hirani, Lynne Nazareth, Einko Topper, Richard Gibbs, Erdogan Memili BMC Genomics 2009, 10:176 (24 April 2009)

Overview - dataset comparison I   Open Access

Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection

Mogens Lund, Goutam Sahana, Dirk-Jan de Koning, Guosheng Su, Örjan Carlborg BMC Proceedings 2009, 3(Suppl 1):S1 (23 February 2009)

Methodology article   Open Access Highly Accessed

SNP discovery in swine by reduced representation and high throughput pyrosequencing

Ralph T Wiedmann, Timothy PL Smith, Dan J Nonneman BMC Genetics 2008, 9:81 (4 December 2008)

Longer-read pyrosequencing-based technologies have identified a large number of randomly distributed single nucleotide polymorphisms (SNPs) in pigs, enabling genotyping of commercial pig populations to proceed more easily

Research article   Open Access

Linkage disequilibrium compared between five populations of domestic sheep

Jennifer RS Meadows, Eva KF Chan, James W Kijas BMC Genetics 2008, 9:61 (30 September 2008)

Research article   Open Access

High density linkage disequilibrium maps of chromosome 14 in Holstein and Angus cattle

Elisa Marques, Robert D Schnabel, Paul Stothard, Davood Kolbehdari, Zhiquan Wang, Jeremy F Taylor, Stephen S Moore BMC Genetics 2008, 9:45 (8 July 2008)

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An assessment of population structure in eight breeds of cattle using a whole genome SNP panel

Stephanie D McKay, Robert D Schnabel, Brenda M Murdoch, Lakshmi K Matukumalli, Jan Aerts, Wouter Coppieters, Denny Crews, Emmanuel Neto, Clare A Gill, Chuan Gao, Hideyuki Mannen, Zhiquan Wang, Curt P Van Tassell, John L Williams, Jeremy F Taylor, Stephen S Moore BMC Genetics 2008, 9:37 (20 May 2008)

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Extent of genome-wide linkage disequilibrium in Australian Holstein-Friesian cattle based on a high-density SNP panel

Mehar S Khatkar, Frank W Nicholas, Andrew R Collins, Kyall R Zenger, Julie AL Cavanagh, Wes Barris, Robert D Schnabel, Jeremy F Taylor, Herman W Raadsma BMC Genomics 2008, 9:187 (24 April 2008)